| Identification |
|---|
| HMDB Protein ID
| CDBP03144 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin gamma-C4 |
| Description
| Not Available |
| Synonyms
|
- PCDH-gamma-C4
|
| Gene Name
| PCDHGC4 |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain |
| GO Classification
|
| Component |
| membrane |
| cell part |
| plasma membrane |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
| homophilic cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Chromosome:5 |
| Locus
| 5q31 |
| SNPs
| PCDHGC4 |
| Gene Sequence
|
>2817 bp
ATGCTCCGCAAGGTGAGAAGCTGGACAGAAATCTGGCGGTGGGCTACCCTTTTGTTCCTC
TTTTACCACCTGGGTTACGTTTGTGGGCAGATCCGCTACCCGGTCCCAGAGGAGTCACAG
GAAGGGACTTTTGTAGGGAATGTCGCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCA
GCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGAC
AGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCC
AGCTGCATCGTGCCCCTGGAGTTTGTCACCGAAGGTCCTTTGGAAATGTACCGAGCAGAG
GTAGAGATCGTAGATGTGAATGATCACGCCCCCCGTTTTCCGCGGCAGCAGCTGGACTTG
GAAATTGGGGAGGCAGCTCCTCCAGGACAGCGTTTCCCGTTGGAAAAGGCTCAGGATGCA
GATGTGGGGAGCAATTCGATTAGCAGCTATAGGCTGAGCTCCAATGAACACTTTGCACTG
GATGTGAAGAAGCGCAGCGACGGCAGCCTGGTCCCAGAGCTGCTCCTGGAGAAGCCTTTG
GATCGAGAGAAGCAATCGGACTACCGCCTGGTGCTGACTGCTGTCGATGGAGGGAACCCG
CCGAGATCTGGCACCGCAGAGCTCCGGGTATCCGTGCTGGACGTAAACGACAACGCCCCA
GCCTTCCAGCAATCCAGCTACAGGATTAGTGTGTTGGAGAGCGCACCAGCGGGCATGGTG
CTCATCCAGCTCAATGCCTCAGACCCGGACCTGGGTCCCAGTGGTAACGTCACCTTTTAT
TTCAGTGGTCATACCCCTGATCGTGTAAGAAACCTCTTTAGCCTGCACCCCACTACTGGA
AAGCTTACTCTTTTGGGGCCCCTAGACTTTGAGAGTGAGAATTACTATGAATTTGATGTG
CGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTG
CTGGACGTAAATGACAATGCCCCTTACATCACAGTGACCTCAGAGCTTGGAACCCTCCCC
GAGAGTGCAGAACCTGGCACTGTGGTGGCACTTATCAGTGTGCAGGATCCAGACTCAGGG
TCAAACGGAGATGTGAGCCTCCGCATTCCTGACCACTTGCCATTTGCCCTCAAGTCTGCC
TTCAGGAACCAGTTCTCCCTGGTGACTGCTGGACCCTTGGATCGAGAGGCCAAATCTAGC
TATGACATCATGGTCACTGCTTCTGATGCTGGGAACCCTCCTCTCAGTACCCACAGAACT
ATTTTCCTCAATATTTCAGATGTGAATGATAATCCACCCTCTTTCTTTCAGAGGTCACAT
GAGGTGTTTGTTCCTGAGAACAATCGCCCAGGGGACCTGCTTTGCTCCCTTGCAGCCTCT
GACCCAGACTCTGGCTTGAATGCGCTTATCTCCTACTCACTCCTGGAGCCCAGGAATCGA
GATGTATCAGCTTCCTCTTTCATCTCTCTGAACCCCCAGACAGGAGCTGTTCATGCTACT
CGATCCTTTGACTATGAGCAAACCCAGACACTGCAGTTTGAGGTGCAGGCCCGGGATCGG
GGCAACCCACCCCTTAGCAGCACTGTAACAGTTCGTCTATTTGTGCTGGACCTCAATGAC
AATGCTCCAGCTGTGCTCCGTCCTCGGGCCCGGCCTGGTTCCTTATGTCCCCAAGCACTG
CCTCCATCAGTTGGTGCTGGCCACCTAATCACAAAGGTGACTGCTGTGGACTTGGATTCA
GGTTACAATGCTTGGGTTTCCTATCAGCTCCTGGAGGCCCCAGATCCCAGCCTGTTTGCA
GTCTCTCGATATGCTGGGGAGGTGCGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCA
CAGAAGCTGGTCATTGTGGTAAAGGATAGTGGTAGTCCACCACTCTCTACCTCTGTTACT
CTCTTAGTGTCCTTAGAGGAAGACACTCATCCAGTTGTCCCAGATCTTCGAGAATCTTCA
GCTCCAAGGGAAGGAGAATCTCGTCTAACCCTCTACTTGGCTGTGTCCCTAGTGGCAATT
TGCTTTGTCTCCTTTGGCTCATTCGTGGCACTACTCTCTAAGTGTCTTCGTGGGGCAGCC
TGTGGAGTCACATGCTTTCCTGCTGGCACCTGTGCCTGTCTCACCAGATCTCGAAGGAGG
GAGGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCCTATC
AAGTTTGTTGATGTGGGAGGCCACTCTCATGGCTGTACACCCTTGGCTTCTGCACCCACT
CGGAGTGATAGCTTCATGATGGTGAAGTCACCCAGTGCACCTATGGCAGGGGAGCCTGTT
CGCCCAAGCTGCCCACCCTCTGATCTTCTCTATGGGCTAGAGCAAGCCCCGCCCAACACG
GACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGAC
ACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCG
TCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGA
TTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAAT
GTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAG
GCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
|
| Protein Properties |
|---|
| Number of Residues
| 938 |
| Molecular Weight
| 101212.6 |
| Theoretical pI
| 4.97 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin gamma-C4
MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLS
ARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAE
VEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFAL
DVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAP
AFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG
KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELGTLP
ESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSS
YDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAAS
DPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDR
GNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS
GYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVT
LLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAA
CGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLASAPT
RSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDD
TGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQN
VYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
|
| External Links |
|---|
| GenBank ID Protein
| 5456982 |
| UniProtKB/Swiss-Prot ID
| Q9Y5F7 |
| UniProtKB/Swiss-Prot Entry Name
| PCDGL_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| AF152338 |
| GeneCard ID
| PCDHGC4 |
| GenAtlas ID
| PCDHGC4 |
| HGNC ID
| HGNC:8717 |
| References |
|---|
| General References
| Not Available |