| Identification |
|---|
| HMDB Protein ID
| CDBP03142 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin gamma-B7 |
| Description
| Not Available |
| Synonyms
|
- PCDH-gamma-B7
|
| Gene Name
| PCDHGB7 |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain |
| GO Classification
|
| Component |
| membrane |
| cell part |
| plasma membrane |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
| homophilic cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Chromosome:5 |
| Locus
| 5q31 |
| SNPs
| PCDHGB7 |
| Gene Sequence
|
>2790 bp
ATGGGAGGGAGCTGCGCGCAGAGGCGCCGGGCCGGCCCGCGGCAGGTACTATTTCCTTTG
CTGCTGCCTTTGTTCTACCCCACGCTGTGTGAGCCGATCCGCTACTCGATTCCGGAGGAG
CTGGCCAAGGGCTCGGTGGTGGGGAACCTCGCTAAGGATCTAGGGCTTAGTGTCCTGGAT
GTGTCGGCTCGCGAGCTGCGAGTGAGCGCGGAGAAGCTGCACTTCAGCGTAGACGCGCAG
AGCGGGGACTTACTTGTGAAGGACCGAATAGACCGTGAGCAAATATGCAAAGAGAGAAGA
AGATGTGAGTTGCAATTGGAAGCTGTGGTGGAAAATCCTTTAAATATTTTTCATGTCATT
GTGGTGATTGAGGATGTTAATGACCACGCCCCTCAATTCCGGAAAGATGAAATAAACTTA
GAAATCAGTGAATCCGTCAGCCTGGGGATGGGAACAATTCTTGAGTCTGCAGAAGATCCT
GATATTAGTATGAATTCGCTGAGCAAATACCAACTAAGTCCTAACGAGTATTTCTCATTG
GTGGAGAAAGACAATCCTGATGGTGGCAAATATCCAGAATTAGTATTGCAGAAGACTCTG
GACCGAGAAACGCAGAGCGCTCACCACTTGGTACTGACCGCCTTAGATGGTGGGGACCCT
CCCCGAAGCGGTACTGCTCAGATAAGAATCCTGGTAATAGATGCCAATGACAACCCCCCA
GTGTTCAGCCAGGACGTGTACAGGGTTAGCCTTCGGGAAGACGTGCCTCCAGGCACCTCC
ATCCTGAGAGTGAAGGCCACTGACCAGGACGAGGGCATCAACTCAGAGATCACTTATTCC
TTCTTTGGTGTGGCTGACAAAGCTCAGCACGTGTTCTCTCTGGATTACACTACAGGAAAC
ATTCTAACTCAGCAGCCTTTGGATTTTGAAGAAGTAGAAAGATATACGATAAACATAGAA
GCAAAAGACCGAGGATCTCTCTCAACACGGTGTAAAGTAATTGTAGAAGTTGTAGACGAA
AACGACAACAGCCCAGAAATAATCATCACGTCACTCTCTGATCAGATTATGGAGGATTCC
CCTCCAGGAGTGGTTGTTGCCCTCTTCAAAACACGGGACCAAGACTCAGGGGAAAATGGG
GAAGTCAGGTGTAGCTTAAGTAGAGGTGTTCCATTTAAGATTCATTCTTCTTCTAATAAT
TACTACAAGCTAGTAACAGATGAGGCCCTGGATCGGGAGCAGACCCCAGAGTACAACGTC
ACCATCGCAGCCACAGACAGGGGCAAGCCTCCGTTATCCTCCAGCAAAACCATAACCCTG
CACATTACTGACGTCAATGACAACGCGCCGGTTTTCGGACAGTCAGCCTACCTGGTCCAC
GTGCCAGAAAACAACCAGCCGGGTGCCTCCATAGCGCAAGTCAGTGCCTCTGACCCAGAC
TTCGGGCTCAACGGCCGTGTCTCCTACTCTCTCATTGCCAGCGACCTGGAGTCACGAACG
CTGTCGTCCTACGTGTCCGTGAGCGCGCAGAGCGGGGTGGTGTTCGCGCAGCGCGCCTTC
GACCACGAGCAGCTGCGCACCTTCGAGCTCACGCTGCAGGCCCGCGACCAGGGCTCGCCC
GCGCTCAGCGCCAATGTGAGCCTGCGCGTGTTGGTGGGCGACCGTAACGACAACGCACCG
CGGGTGCTGTACCCTGCGCTGGGTCCCGACGGCTCCGCGCTCTTCGACACAGTGCCGCGG
GCCGCGCAGCCAGGCTACCTGGTGACCAAGGTGGTGGCCGTGGACGCGGACTCGGGGCAC
AATGCCTGGCTGTCCTACCACGTGGTGCAGGCCAGTGAGCCCGGGCTCTTCAGCCTGGGG
CTGCGAACAGGCGAGGTGCGCATGGTGCGTGCTTTGGGTGACAAGGACTCGGTCCGCCAG
CGCCTGCTAGTCGCTGTAAGAGATGGAGGACAGCCACCCCTTTCAGCCACTGCCACGCTG
CACCTGGTGTTCGCAGATAGCTTGCAAGAGGTACTGCCGGATTTCAGCGACCATCCCACA
CCCTCTGACTCCCAGGCTGAGATGCAGTTTTACCTGGTGGTGGCCTTGGCCTTGATTTCT
GTGCTCTTTCTCCTCGCGGTGATTCTAGCTATTGCTCTACGCCTGCGACAGTCTTTCAGC
CCTACTGCAGGAGACTGCTTTGAGTCAGTTCTCTGCTCCAAGTCCGGACCTGTGGGTCCC
CCCAACTACAGTGAGGGAACGTTGCCCTATGCCTATAATTTTTGTGTGCCTGGGGATCAA
ATGAATCCAGAATTTAATTTTTTCACATCTGTTGATCATTGTCCAGCCACACAAGATAAC
CTCAACAAAGATAGCATGCTACTGGCTAGCATTTTAACTCCCAGCGTTGAAGCAGATAAG
AAGATTCTTAAACAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGA
CCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTT
GACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGC
TCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTC
ACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACA
CTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAG
AAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
|
| Protein Properties |
|---|
| Number of Residues
| 929 |
| Molecular Weight
| 100973.2 |
| Theoretical pI
| 4.71 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin gamma-B7
MGGSCAQRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLD
VSARELRVSAEKLHFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVI
VVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSL
VEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPP
VFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGN
ILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDS
PPGVVVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNV
TIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPD
FGLNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSP
ALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGH
NAWLSYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATL
HLVFADSLQEVLPDFSDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFS
PTAGDCFESVLCSKSGPVGPPNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDN
LNKDSMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
|
| External Links |
|---|
| GenBank ID Protein
| 5456975 |
| UniProtKB/Swiss-Prot ID
| Q9Y5F8 |
| UniProtKB/Swiss-Prot Entry Name
| PCDGJ_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| AF152336 |
| GeneCard ID
| PCDHGB7 |
| GenAtlas ID
| PCDHGB7 |
| HGNC ID
| HGNC:8714 |
| References |
|---|
| General References
| Not Available |