Identification |
HMDB Protein ID
| CDBP03137 |
Secondary Accession Numbers
| Not Available |
Name
| Protocadherin gamma-B2 |
Description
| Not Available |
Synonyms
|
- PCDH-gamma-B2
|
Gene Name
| PCDHGB2 |
Protein Type
| Metal Binding |
Biological Properties |
General Function
| Involved in calcium ion binding |
Specific Function
| Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain |
GO Classification
|
Component |
membrane |
cell part |
plasma membrane |
Function |
ion binding |
cation binding |
metal ion binding |
binding |
calcium ion binding |
Process |
cell-cell adhesion |
homophilic cell adhesion |
cell adhesion |
cellular process |
|
Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
Pathways
|
Not Available
|
Gene Properties |
Chromosome Location
| Chromosome:5 |
Locus
| 5q31 |
SNPs
| PCDHGB2 |
Gene Sequence
|
>2796 bp
ATGAAAGCGAGCTCAGGGAGGTGCGGGCTGGTGCGGTGGCTGCAGGTACTGTTGCCCTTC
CTGTTGTCTTTGTTCCCCGGGGCTCTCCCAGTCCAGATCCGCTATTCAATTCCAGAGGAG
CTGGCCAAAAACTCGGTCGTAGGAAACCTCGCCAAGGATCTGGGGCTCAGCGTCCGGGAC
TTGCCAGCCCGGAAGCTGCGGGTTAGCGCGGAGAAGGAATATTTCACAGTAAACCCAGAA
AGCGGAGACTTACTTGTGAGTGACAGAATAGACCGAGAACAGATATGCGGGAAGCAGCCT
CTGTGTGTTCTGGATTTCGATACTGTCGCTGAAAATCCACTAAATATTTTCTACATAGCA
GTAATTGTGCAGGATATAAATGATAATACCCCGCTATTCAAACAGACTAAGATTAATTTA
AAAATTGGCGAATCCACTAAGCCAGGTACAACATTTCCACTTGACCCAGCCCTGGATTCA
GATGTTGGTCCTAACTCACTACAAAGATACCACCTTAATGACAACGAGTACTTTGATCTC
GCTGAGAAACAGACTCCAGATGGTCGTAAATATCCTGAGTTGATTCTAAAACACTCTCTG
GACAGAGAAGAGCACAGTTTACATCAATTGGTCCTCACAGCTGTGGATGGCGGAGACCCA
CCTCAAAGTGGCACGACCCAAATCCGAATCAAAGTCACGGATGCCAACGATAACCCTCCA
GTGTTCAGCCAGGACGTGTACAGGGTCACCCTGAGGGAGGACGTGCCGCCGGGCTTCTTT
GTGCTTCAAGTGACAGCCACCGACCGGGATGAAGGCATAAACGCAGAGATCACCTACTCC
TTTCATAATGTGGACGAACAAGTGAAACACTTTTTCAACTTAAATGAAAAAACAGGAGAA
ATCACGACAAAGGATGATTTGGATTTTGAGATTGCAAGTAGTTACACTCTGAGTATCGAA
GCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGAC
AACGATTGTGCACCTGAAGTTATTGTGACTTCAGTATCTACTCCCCTACCGGAGGATTCG
CCACCAGGAACAGTGATCGCCTTGATAAAAACGAGAGACAGAGACTCTGGAGAAAATGGA
GAAGTTTACTGCCAAGTGTTGGGAAATGCCAAGTTTATTTTGAAATCTTCCTCAAAGAAC
TATTACAAACTAGTGACAGACGGCGCTCTGGACCGGGAGGAGATCCCAGAATACAATCTC
ACCATCACAGCCACCGACGGGGGCAAGCCGCCCCTCTCCTCCAGCATAATTGTCACCCTG
CACATCTCCGACGTCAACGATAATGCCCCAGTTTTCCAACAGACTTCCTACATGGTTCAC
GTGGCAGAGAACAATCCTCCTGGCGCCTCTATCGCTCAAATCAGTGCCTCTGACCCTGAC
TTGGGCCCCAGTGGCCAAGTTTCCTACTCCATCGTAGCGAGCGACCTGAAGCCGCGGGAG
ATTTTATCCTACGTGTCCGTGAGCGCGCAGAGCGGGGTGGTGTTCGCGCAGCGCGCCTTC
GATCATGAGCAGCTGCGCGCCTTCGAGCTCACACTGCAGGCCCGCGACCAGGGCTCGCCC
GCGCTCAGCGCCAACGTGAGCCTGCGCGTGTTAGTGGGCGACCTCAATGACAATGCGCCA
CGGGTGCTGTACCCCGCGCTGGGGCCTGATGGCTCCGCCCTCTTCGATATGGTGCCACGC
GCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGCAGACTCAGGACAC
AACGCTTGGCTGTCCTACCACGTGCTGCAGGCCAGCGAGCCCGGGCTCTTCAGCCTGGGG
TTGCGCACGGGTGAGGTGCGCACAGCGCGTGCCTTGGGCGACAGGGACGCGGCCCGCCAG
CGCCTGCTGGTCGCTGTGCGTGATGGAGGACAGCCGCCACTCTCCGCTACGGCCACGCTG
CACCTAATCTTCGCGGATAGCCTGCAAGAGGTATTGCCAGACCTCAGCGACCGCCGGGAG
CCCTCTGACCCCCAGGCAAAACTGCAGTTTTACCTGGTTGTGGCCTTGGCCTTGATCTCA
GTGCTCTTCTTCCTCGCGGTGATTCTGGCAATCTCCCTGCGCCTGCGACTCTCTTCCAGG
TCAGATGCTTGGGACTGTTTTCAGCCTGGTCTCAGCTCCAAGCCTGGACCTGGGGTTCTC
CCCAATTACAGTGAGGGTACATTGCCCTATTCCTACAACCTGTGTGTTGCCTCACAATCA
GCCAAGACAGAGTTCAATTTTCTGAACATAACCCCGGAATTGGTTCCCGCGCAAGATCTC
GTCTGTGACAATGCCTCTTGGGAACAAAATACAAATCATGGAGCCGCTGGGGTCCCTTTT
GCCTCAGATACTATTTTGAAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC
CAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAAC
CAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGAT
GGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCC
CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAAT
GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGC
AACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
|
Protein Properties |
Number of Residues
| 931 |
Molecular Weight
| 100874.1 |
Theoretical pI
| 4.66 |
Pfam Domain Function
|
|
Signals
|
|
Transmembrane Regions
|
|
Protein Sequence
|
>Protocadherin gamma-B2
MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD
LPARKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIA
VIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDL
AEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPP
VFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE
ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDS
PPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNL
TITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPD
LGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSP
ALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH
NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL
HLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSR
SDAWDCFQPGLSSKPGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDL
VCDNASWEQNTNHGAAGVPFASDTILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
|
External Links |
GenBank ID Protein
| 5456959 |
UniProtKB/Swiss-Prot ID
| Q9Y5G2 |
UniProtKB/Swiss-Prot Entry Name
| PCDGE_HUMAN |
PDB IDs
|
Not Available |
GenBank Gene ID
| AF152331 |
GeneCard ID
| PCDHGB2 |
GenAtlas ID
| PCDHGB2 |
HGNC ID
| HGNC:8709 |
References |
General References
| Not Available |