| Identification |
|---|
| HMDB Protein ID
| CDBP03132 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin gamma-A9 |
| Description
| Not Available |
| Synonyms
|
- PCDH-gamma-A9
|
| Gene Name
| PCDHGA9 |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain |
| GO Classification
|
| Component |
| membrane |
| cell part |
| plasma membrane |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
| homophilic cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Chromosome:5 |
| Locus
| 5q31 |
| SNPs
| PCDHGA9 |
| Gene Sequence
|
>2799 bp
ATGGCAGCTCCAACCAAATGCCAGCTCCGCGGAAGATTAGTCCTGCTATGCTCGCTCCTG
GGGATGCTATGGGAGGCCAGGGCCAGTCAGATTCGCTACTCAGTGCCTGAAGAGACAGAA
AAGGGCTATATTGTGGGCAACATCTCCAAGGACCTGGCTCTGGAGCCCCGGGAGCTGGCG
GAGCGCCGAGTCCGCATCGTCTCTAGAGGTAGGACGCAGCTTTTCTCTCTGAACCCGCGC
AGCGGCACCTTGGTCACCGCGGGTAGGATAGACCGGGAGGAGCTCTGTGCTCAGAGCCCG
CGGTGTCTGGTGAACTTTAAAGTCCTGGTTGAAGACAGAGTGAAACTGTACGGAATAGAA
ATAGAAGTAACTGATATTAACGACAGCGCCCCAAAGTTCCAGGCCGAAAGTCTGGAAGTA
AAAATTAACGAAATCGCGGTTCCTGGAGCACGTTATCCACTTCCAGAAGCTATTGATCCG
GATGTTGGCGTGAACTCCCTCCAGAGCTACCAGCTCAGCCCCAATCACCACTTCTCCCTG
AACGTGCAGACTGGAGACAATGGAGCCATAAACCCAGAGCTGGTGCTGGAGCGCGCCCTG
GACAGGGAGGAGGCAACTGCCCACCACCTGGTCCTCACGGCCTCGGATGGCGGCGAGCCG
CGTCGCTCCAGCACAGTGCGCATCCATGTGACAGTGTTGGATACAAATGATAATGCCCCG
GTTTTTGCTCAACGGATTTACCGAGTTAAAGTCCTTGAGAACGTGCCCCCAGGCACCTGG
CTGCTTACTGCAACAGCCAGCGACCTGGATGAGGGAATCAACGGAAAAGTGGCATACAAA
TTCTGGAAAATTAATGAAAAACAATCTCTGCTATTCCAGCTTAATGAAAATACTGGGGAA
ATATCAACAGCAAAAAGTCTAGATTATGAAGAATGTTCATTTTATGAAATGGAAATACAA
GCTGAAGATGGTGGGGGATTGAAAGGGTGGACAAAAGTGCTCATTTCGGTGGAAGATGTA
AATGACAATAGACCTGAAGTGACCATTACATCTCTGTTTAGCCCAGTGAGAGAAGACGCA
CCTCAGGGAACAGTAATTCTTCTTTTCAATGCTCATGACCGAGACTCCGGGAAGAATGGT
CAAGTTGTCTGTTCTATCCAGGAGAATCTATCTTTTACATTAGAAAATTCAGAAGAAGAT
TATTACAGATTGTTGACGGCCCAAATTCTTGACCGAGAAAAAGCCTCAGAATATAATATC
ACGGTGACTGCAACAGACAGAGGAACTCCGCCCCTGTCCACAGAAATTCACATCACCCTG
CAAGTGACTGACATCAATGATAATCCACCTGCTTTCTCTCAAGCCTCCTACTCAGTCTAC
CTCCCGGAAAACAACGCCAGAGGTACTTCCATCTTCTCCGTGATTGCCTATGACCCTGAT
AGCAATGAGAATTCTAGAGTTATTTACTCCTTGGCAGAGGATACCATCCAAGGGTCTCCT
CTCTCCACCTATGTCTCTATTAACTCAGACACTGGTGTGCTGTATGCTCTGTGCTCCTTT
GACTATGAGCAGTTTAGAGATTTGCAAATGCAGGTGACGGCAAGTGACAGTGGAAGCCCA
CCACTTAGCAGCAATGTGTCATTGAGACTGTTTGTTTTGGACCAGAATGACAATGCCCCA
GAAATCCTGTACCCTGCCCTCCCCACTGATGGTTCTACTGGTGTGGAGCTGGCACCCCGC
TCTGCAGAGCCTGGCTACCTGGTGACCAAGGTGGTGGCAGTGGACAGAGACTCAGGCCAG
AATGCTTGGCTCTCCTACCGCCTATTCAAGGCCAGTGAGCCAGGGCTCTTCTCGGTGGGG
CTGCACACAGGTGAAGTGCGCACAGCTCGGGCCCTGCTAGATAGAGATGCGCTCAAACAG
AGCCTTGTGGTGGCTGTACAGGACCATGGCCAGCCCCCTCTCTCGGCCACTGTCACGCTC
ACAGTAGCCATAGCTGACAGCATCCCAGACATCCTGGCTGACCTGGGCAGTCTTCAGATC
CCTGCAGACCTGGAGGCCTCAGACCTTACCCTCTACCTCGTTGTGGCTGTGGCAGTCGTC
TCCTGTGTCTTCCTCACCTTCGTTATCACGCTGCTGGCCCTCAGGCTGAGGCACTGGCAC
TCCTCGCATCTGCTGCGGGCTACCAGTGATGGGTTGGCTGGTGTGCCCACCTCACACTTT
GTGGGTGTAGATGGGGTTCGAGCTTTCCTACAGACCTATTCTCAGGAGTTCTCCCTCACC
GCTGACTCAAGGAAGAGTCACCTGATCTTCCCCCAGCCCAACTATGCAGACACACTCATC
AGCCAGCAGAGCTGTGAGAAAAATGAGCCTTTGTGCGTCTCTGTTGATTCCAAGTTTCCT
ATAGAAGACACCCCTTTGGTTCCGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAG
GCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAAC
AACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCT
GATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGA
CCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGC
AATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAAT
GGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
|
| Protein Properties |
|---|
| Number of Residues
| 932 |
| Molecular Weight
| 101686.0 |
| Theoretical pI
| 4.66 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin gamma-A9
MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA
ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE
IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL
NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP
VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE
ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA
PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI
TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD
SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP
PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH
SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI
SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
|
| External Links |
|---|
| GenBank ID Protein
| 5456952 |
| UniProtKB/Swiss-Prot ID
| Q9Y5G4 |
| UniProtKB/Swiss-Prot Entry Name
| PCDG9_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| AF152329 |
| GeneCard ID
| PCDHGA9 |
| GenAtlas ID
| PCDHGA9 |
| HGNC ID
| HGNC:8707 |
| References |
|---|
| General References
| Not Available |