| Identification |
|---|
| HMDB Protein ID
| CDBP03086 |
| Secondary Accession Numbers
| Not Available |
| Name
| Protocadherin-17 |
| Description
| Not Available |
| Synonyms
|
- Protocadherin-68
|
| Gene Name
| PCDH17 |
| Protein Type
| Metal Binding |
| Biological Properties |
|---|
| General Function
| Involved in calcium ion binding |
| Specific Function
| Potential calcium-dependent cell-adhesion protein |
| GO Classification
|
| Component |
| membrane |
| cell part |
| plasma membrane |
| Function |
| ion binding |
| cation binding |
| metal ion binding |
| binding |
| calcium ion binding |
| Process |
| homophilic cell adhesion |
| cell adhesion |
| cellular process |
| cell-cell adhesion |
|
| Cellular Location
|
- Cell membrane
- Single-pass type I membrane protein
|
| Pathways
|
Not Available
|
| Gene Properties |
|---|
| Chromosome Location
| Chromosome:1 |
| Locus
| 13q21.1 |
| SNPs
| PCDH17 |
| Gene Sequence
|
>3480 bp
ATGTACCTTTCCATCTGTTGCTGCTTTCTTCTATGGGCCCCTGCCCTCACTCTCAAGAAC
CTCAACTACTCCGTGCCGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACATCGGCAGG
GATGCTCGACTGCAGCCTGGGCTTCCGCCTGCAGAGCGCGGCGGCGGAGGGCGCAGCAAG
TCGGGTAGCTACCGGGTGCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGACGCAGAC
AGCGGGCTCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCC
AAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTA
GAGATCCAGGACATCAACGACAACGCGCCCTCCTTCTCCTCGGACCAGATCGAAATGGAC
ATCTCGGAGAACGCTGCTCCGGGCACCCGCTTCCCCCTCACCAGCGCACATGACCCCGAC
GCCGGCGAGAATGGGCTCCGCACCTACCTGCTCACGCGCGACGATCACGGCCTCTTTGGA
CTGGACGTTAAGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGAAGGCT
CTGGACCGCGAGCAACAGAATCACCATACGCTCGTGCTGACTGCCCTGGACGGTGGCGAG
CCTCCACGTTCCGCCACCGTACAGATCAACGTGAAGGTGATTGACTCCAACGACAACAGC
CCGGTCTTCGAGGCGCCATCCTACTTGGTGGAACTGCCCGAGAACGCTCCGCTGGGTACA
GTGGTCATCGATCTGAACGCCACCGACGCCGATGAAGGTCCCAATGGTGAAGTGCTCTAC
TCTTTCAGCAGCTACGTGCCTGACCGCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACC
GGCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGGAAAACGGGATGCTGGAGATTGAC
GTGCAGGCCCGAGACCTGGGGCCTAACCCTATCCCAGCCCACTGCAAAGTCACGGTCAAG
CTCATCGACCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCGCCAGGGGGCG
CTGAGCGAGGCCGCCCCTCCCGGCACCGTCATCGCCCTGGTGCGGGTCACTGACCGGGAC
TCTGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGGCGGAGGAGGGACGGGCGGCGGC
GGGGGCCTGGGCGGGCCCGGGGGTTCCGTCCCCTTCAAGCTTGAGGAGAACTACGACAAC
TTCTACACGGTGGTGACTGACCGCCCGCTGGACCGCGAGACACAAGACGAGTACAACGTG
ACCATCGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATC
AAGATTCTAGACGAGAACGACAACCCGCCTCGGTTCACCAAAGGGCTCTACGTGCTTCAG
GTGCACGAGAACAACATCCCGGGAGAGTACCTGGGCTCTGTGCTCGCCCAGGATCCCGAC
CTGGGCCAGAACGGCACCGTATCCTACTCTATCCTGCCCTCGCACATCGGCGACGTGTCT
ATCTACACCTATGTGTCTGTGAATCCCACGAACGGGGCCATCTACGCCCTGCGCTCCTTT
AACTTCGAGCAGACCAAGGCTTTTGAGTTCAAGGTGCTTGCTAAGGACTCGGGGGCGCCC
GCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACAGTGCTAGACGTGAATGACAACGCG
CCAGTGATCGTGCTCCCCACGCTGCAGAACGACACCGCGGAGCTGCAGGTGCCGCGCAAC
GCTGGCCTGGGCTATCTGGTGAGCACTGTGCGCGCCCTAGACAGCGACTTCGGCGAGAGC
GGGCGTCTCACCTACGAGATCGTGGACGGCAACGACGACCACCTGTTTGAGATCGACCCG
TCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGCCCGTGGTGGAG
CTGGTGGTGAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATC
ATCCGCTCGGTGAGCGGATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCAC
CACTGGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCACTATCTCCATCATCCTCCTA
GCGGCCATGATCACCATCGCCGTCAAGTGCAAGCGCGAGAACAAGGAGATCCGCACTTAC
AACTGCCGCATCGCCGAGTACAGCCACCCGCAGCTGGGTGGGGGCAAGGGCAAGAAGAAG
AAGATCAACAAAAATGATATCATGCTGGTGCAGAGCGAAGTGGAGGAGAGGAACGCCATG
AACGTCATGAACGTGGTGAGCAGCCCCTCCCTGGCCACCTCCCCCATGTACTTCGACTAC
CAGACCCGCCTGCCCCTCAGCTCGCCCCGGTCGGAGGTGATGTATCTCAAACCGGCCTCC
AACAACCTGACTGTCCCTCAGGGGCACGCGGGCTGCCACACCAGCTTCACCGGACAAGGG
ACTAATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAATTCAGACAGACAATTTTCCC
GCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTTTAAG
GACCCAGAAAGAGCCAGCCTGAGAGACAGTGGGCACGGGGACAGTGATCAGGCTGACAGT
GACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAAGATG
AAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGC
ACAGATGAATGCCGAGTGCTTGGTCATTCTGACAGGTGCTGGATGCCACAGTTCCCTGCA
GCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCT
AATGTTGAGACTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACA
TTTGGAAAAGACAAGCGAGAGCACACTATTCTCATTGCCAACGTTAAACCTTATTTAAAA
GCCAAACGTGCCCTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACC
AAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAA
CCAGGAGCCCTGGCTGAAGCAAGCAGTCAGTACTTGCCCACTGACAGTCAATATCTGTCA
CCTAGTAAGCAACCAAGAGACCCTCCCTTCATGGCTTCCGATCAGATGGCAAGGGTCTTT
GCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAG
CTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATGCAGAGGAAGTTGTGAGA
GAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGA
|
| Protein Properties |
|---|
| Number of Residues
| 1159 |
| Molecular Weight
| 126228.3 |
| Theoretical pI
| 4.81 |
| Pfam Domain Function
|
|
| Signals
|
|
|
Transmembrane Regions
|
|
| Protein Sequence
|
>Protocadherin-17
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARLQPGLPPAERGGGGRSK
SGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIKV
EIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFG
LDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNS
PVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT
GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGA
LSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQYLS
PSKQPRDPPFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRK
|
| External Links |
|---|
| GenBank ID Protein
| 94538350 |
| UniProtKB/Swiss-Prot ID
| O14917 |
| UniProtKB/Swiss-Prot Entry Name
| PCD17_HUMAN |
| PDB IDs
|
Not Available |
| GenBank Gene ID
| NM_001040429.2 |
| GeneCard ID
| PCDH17 |
| GenAtlas ID
| PCDH17 |
| HGNC ID
| HGNC:14267 |
| References |
|---|
| General References
| Not Available |