<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>1.0</version>
  <creation_date>2020-03-18 23:23:15 UTC</creation_date>
  <update_date>2022-12-13 23:36:24 UTC</update_date>
  <accession>CDB000059</accession>
  <secondary_accessions>
  </secondary_accessions>
  <name>Histidine</name>
  <description>Histidine, or l-histidine, abbreviated His or H, an alpha-amino acid, is propanoic acid bearing an amino substituent at position 2 and a 1H-imidazol-4-yl group at position 3. Histidine is an essential amino acid that is not synthesized de novo in humans and must be obtained though ingestion of histidine. L-Histidine is a strong basic compound. It is an odorless white crystalline powder with a bitter taste. In humans, L-histidine is involved in methylhistidine metabolism.  Histidine biosynthesis has been well studied in E. coli and involves eight gene products (His1, 2, 3, 4, 5, 6, 7, and 8, from a single gene) and occurs in ten steps. This is possible because a single gene product can catalyze more than one reaction (PMID:8852895).  L-Histidine is found in  high concentrations in beluga whales, caseins, and bearded seals and in lower concentration in prairie turnips, puddings, and black walnuts. L-Histidine has also been detected in climbing beans, sago palms, vanilla, pitanga (cherry) and allspices making histidine a potential biomarker for the consumption of these foods. Histidine is an amino acid found in cannabis plants (PMID: 6991645). It is a favouring ingredient and dietary supplement. Histidine was shown to have anti-hypertensive effects, decreasing blood pressure,  by modulating the histamine H3 receptor (PMID: 19566844). Histidine is a precursor of histamine, an inflammatory product associated with allergies ( https://doi.org/10.1016/B978-0-12-801238-3.66093-2).  Histidine can be post-translationally modified to¬†3-methylhistidine, which is excreted in urine and is a¬†biomarker¬†of skeletal muscle damage (PMID: 16079625).</description>
  <synonyms>
    <synonym>(S)-4-(2-Amino-2-carboxyethyl)imidazole</synonym>
    <synonym>(S)-alpha-Amino-1H-imidazole-4-propanoic acid</synonym>
    <synonym>(S)-alpha-Amino-1H-imidazole-4-propionic acid</synonym>
    <synonym>H</synonym>
    <synonym>His</synonym>
    <synonym>HISTIDINE</synonym>
    <synonym>L-(-)-Histidine</synonym>
    <synonym>L-Histidin</synonym>
    <synonym>(S)-a-Amino-1H-imidazole-4-propanoate</synonym>
    <synonym>(S)-a-Amino-1H-imidazole-4-propanoic acid</synonym>
    <synonym>(S)-alpha-Amino-1H-imidazole-4-propanoate</synonym>
    <synonym>(S)-Α-amino-1H-imidazole-4-propanoate</synonym>
    <synonym>(S)-Α-amino-1H-imidazole-4-propanoic acid</synonym>
    <synonym>(S)-a-Amino-1H-imidazole-4-propionate</synonym>
    <synonym>(S)-a-Amino-1H-imidazole-4-propionic acid</synonym>
    <synonym>(S)-alpha-Amino-1H-imidazole-4-propionate</synonym>
    <synonym>(S)-Α-amino-1H-imidazole-4-propionate</synonym>
    <synonym>(S)-Α-amino-1H-imidazole-4-propionic acid</synonym>
    <synonym>(S)-1H-Imidazole-4-alanine</synonym>
    <synonym>(S)-2-Amino-3-(4-imidazolyl)propionsaeure</synonym>
    <synonym>(S)-Histidine</synonym>
    <synonym>(S)1H-Imidazole-4-alanine</synonym>
    <synonym>3-(1H-Imidazol-4-yl)-L-alanine</synonym>
    <synonym>Amino-1H-imidazole-4-propanoate</synonym>
    <synonym>Amino-1H-imidazole-4-propanoic acid</synonym>
    <synonym>Amino-4-imidazoleproprionate</synonym>
    <synonym>Amino-4-imidazoleproprionic acid</synonym>
    <synonym>Glyoxaline-5-alanine</synonym>
    <synonym>Histidine, L isomer</synonym>
    <synonym>Histidine, L-isomer</synonym>
    <synonym>L-Isomer histidine</synonym>
    <synonym>L-Histidine</synonym>
  </synonyms>
  <chemical_formula>C6H9N3O2</chemical_formula>
  <average_molecular_weight>155.15</average_molecular_weight>
  <monisotopic_molecular_weight>155.0695</monisotopic_molecular_weight>
  <iupac_name>(2S)-2-amino-3-(1H-imidazol-5-yl)propanoic acid</iupac_name>
  <traditional_iupac>L-histidine</traditional_iupac>
  <cas_registry_number>30641-68-0</cas_registry_number>
  <smiles>N[C@@H](CC1=CN=CN1)C(O)=O</smiles>
  <inchi>InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)/t5-/m0/s1</inchi>
  <inchikey>HNDVDQJCIGZPNO-YFKPBYRVSA-N</inchikey>
  <taxonomy>
    <description> belongs to the class of organic compounds known as histidine and derivatives. Histidine and derivatives are compounds containing cysteine or a derivative thereof resulting from reaction of cysteine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.</description>
    <direct_parent>Histidine and derivatives</direct_parent>
    <kingdom>Organic compounds</kingdom>
    <super_class>Organic acids and derivatives</super_class>
    <class>Carboxylic acids and derivatives</class>
    <sub_class>Amino acids, peptides, and analogues</sub_class>
    <molecular_framework>Aromatic heteromonocyclic compounds</molecular_framework>
    <alternative_parents>
      <alternative_parent>Amino acids</alternative_parent>
      <alternative_parent>Aralkylamines</alternative_parent>
      <alternative_parent>Azacyclic compounds</alternative_parent>
      <alternative_parent>Carbonyl compounds</alternative_parent>
      <alternative_parent>Carboxylic acids</alternative_parent>
      <alternative_parent>Heteroaromatic compounds</alternative_parent>
      <alternative_parent>Hydrocarbon derivatives</alternative_parent>
      <alternative_parent>Imidazolyl carboxylic acids and derivatives</alternative_parent>
      <alternative_parent>L-alpha-amino acids</alternative_parent>
      <alternative_parent>Monoalkylamines</alternative_parent>
      <alternative_parent>Monocarboxylic acids and derivatives</alternative_parent>
      <alternative_parent>Organic oxides</alternative_parent>
      <alternative_parent>Organopnictogen compounds</alternative_parent>
    </alternative_parents>
    <substituents>
      <substituent>Alpha-amino acid</substituent>
      <substituent>Amine</substituent>
      <substituent>Amino acid</substituent>
      <substituent>Aralkylamine</substituent>
      <substituent>Aromatic heteromonocyclic compound</substituent>
      <substituent>Azacycle</substituent>
      <substituent>Azole</substituent>
      <substituent>Carbonyl group</substituent>
      <substituent>Carboxylic acid</substituent>
      <substituent>Heteroaromatic compound</substituent>
      <substituent>Histidine or derivatives</substituent>
      <substituent>Hydrocarbon derivative</substituent>
      <substituent>Imidazole</substituent>
      <substituent>Imidazolyl carboxylic acid derivative</substituent>
      <substituent>L-alpha-amino acid</substituent>
      <substituent>Monocarboxylic acid or derivatives</substituent>
      <substituent>Organic nitrogen compound</substituent>
      <substituent>Organic oxide</substituent>
      <substituent>Organic oxygen compound</substituent>
      <substituent>Organoheterocyclic compound</substituent>
      <substituent>Organonitrogen compound</substituent>
      <substituent>Organooxygen compound</substituent>
      <substituent>Organopnictogen compound</substituent>
      <substituent>Primary aliphatic amine</substituent>
      <substituent>Primary amine</substituent>
    </substituents>
    <external_descriptors>
      <external_descriptor>Common amino acids</external_descriptor>
      <external_descriptor>L-alpha-amino acid</external_descriptor>
      <external_descriptor>histidine</external_descriptor>
      <external_descriptor>proteinogenic amino acid</external_descriptor>
    </external_descriptors>
  </taxonomy>
  <experimental_properties>
    <property>
      <kind>water_solubility</kind>
      <value>45.6 mg/mL</value>
      <source/>
    </property>
    <property>
      <kind>logp</kind>
      <value>-3.32</value>
      <source>CHMELIK,J ET AL. (1991)</source>
    </property>
    <property>
      <kind>melting_point</kind>
      <value>287 °C</value>
      <source/>
    </property>
  </experimental_properties>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>-2.67</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-0.34</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logp</kind>
      <value>-3.6</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>pka_strongest_acidic</kind>
      <value>1.85</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>pka_strongest_basic</kind>
      <value>9.44</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>iupac</kind>
      <value>(2S)-2-amino-3-(1H-imidazol-5-yl)propanoic acid</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>average_mass</kind>
      <value>155.15</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>mono_mass</kind>
      <value>155.0695</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>smiles</kind>
      <value>N[C@@H](CC1=CN=CN1)C(O)=O</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>formula</kind>
      <value>C6H9N3O2</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>inchi</kind>
      <value>InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)/t5-/m0/s1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>inchikey</kind>
      <value>HNDVDQJCIGZPNO-YFKPBYRVSA-N</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>polar_surface_area</kind>
      <value>92</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>refractivity</kind>
      <value>38.06</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>polarizability</kind>
      <value>14.67</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>rotatable_bond_count</kind>
      <value>3</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>acceptor_count</kind>
      <value>4</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>donor_count</kind>
      <value>3</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>physiological_charge</kind>
      <value>0</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>formal_charge</kind>
      <value>0</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>number_of_rings</kind>
      <value>1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>bioavailability</kind>
      <value>1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>rule_of_five</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>ghose_filter</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>veber_rule</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>mddr_like_rule</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
  </predicted_properties>
  <kegg_id>C00135</kegg_id>
  <drugbank_id>DB00117</drugbank_id>
  <foodb_id>FDB011856</foodb_id>
  <chemspider_id>6038</chemspider_id>
  <pubchem_compound_id>6274</pubchem_compound_id>
  <chebi_id>15971</chebi_id>
  <pdb_id/>
  <biocyc_id>HIS</biocyc_id>
  <knapsack_id>C00001363</knapsack_id>
  <phenol_explorer_compound_id/>
  <bigg_id>33985</bigg_id>
  <wikipedia_id>L-histidine</wikipedia_id>
  <metlin_id>21</metlin_id>
  <general_references>
    <reference>
      <reference_text>Turner CE, Elsohly MA, Boeren EG: Constituents of Cannabis sativa L. XVII. A review of the natural constituents. J Nat Prod. 1980 Mar-Apr;43(2):169-234. doi: 10.1021/np50008a001.</reference_text>
      <pubmed_id>6991645</pubmed_id>
    </reference>
    <reference>
      <reference_text>Alifano P, Fani R, Lio P, Lazcano A, Bazzicalupo M, Carlomagno MS, Bruni CB: Histidine biosynthetic pathway and genes: structure, regulation, and evolution. Microbiol Rev. 1996 Mar;60(1):44-69.</reference_text>
      <pubmed_id>8852895</pubmed_id>
    </reference>
    <reference>
      <reference_text>Toba H, Nakamori A, Tanaka Y, Yukiya R, Tatsuoka K, Narutaki M, Tokitaka M, Hariu H, Kobara M, Nakata T: Oral L-histidine exerts antihypertensive effects via central histamine H3 receptors and decreases nitric oxide content in the rostral ventrolateral medulla in spontaneously hypertensive rats. Clin Exp Pharmacol Physiol. 2010 Jan;37(1):62-8. doi: 10.1111/j.1440-1681.2009.05227.x.</reference_text>
      <pubmed_id>19566844</pubmed_id>
    </reference>
    <reference>
      <reference_text>Chinkes DL: Methods for measuring tissue protein breakdown rate in vivo. Curr Opin Clin Nutr Metab Care. 2005 Sep;8(5):534-7. doi: 10.1097/01.mco.0000170754.25372.37.</reference_text>
      <pubmed_id>16079625</pubmed_id>
    </reference>
  </general_references>
</compound>

